A0A136JBT9 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136JBT9

Uncharacterized protein. (302 aa)

Predicted Functional Partners:

A0A136J5K5

0.991

A0A136JE04

0.978

A0A136J317

0.975

A0A136ITR4

0.963

A0A136JI02

0.963

A0A136JH84

0.962

A0A136JKN9

0.961

A0A136J1H2

0.956

A0A136JF60

0.949

A0A136JIU5

0.949

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136ITR4	A0A136J1H2	Uncharacterized protein.	Anticodon-binding protein.	0.992
A0A136ITR4	A0A136J317	Uncharacterized protein.	Small-subunit processome.	0.997
A0A136ITR4	A0A136J5K5	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.996
A0A136ITR4	A0A136JBT9	Uncharacterized protein.	Uncharacterized protein.	0.963
A0A136ITR4	A0A136JE04	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.998
A0A136ITR4	A0A136JF60	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.998
A0A136ITR4	A0A136JH84	Uncharacterized protein.	Dip2/Utp12 family-domain-containing protein.	0.998
A0A136ITR4	A0A136JI02	Uncharacterized protein.	Utp14 protein-domain-containing protein.	0.998
A0A136ITR4	A0A136JIU5	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.998
A0A136ITR4	A0A136JKN9	Uncharacterized protein.	Sas10 C-terminal domain-domain-containing protein.	0.994
A0A136J1H2	A0A136ITR4	Anticodon-binding protein.	Uncharacterized protein.	0.992
A0A136J1H2	A0A136J317	Anticodon-binding protein.	Small-subunit processome.	0.991
A0A136J1H2	A0A136J5K5	Anticodon-binding protein.	Bms1-type G domain-containing protein.	0.996
A0A136J1H2	A0A136JBT9	Anticodon-binding protein.	Uncharacterized protein.	0.956
A0A136J1H2	A0A136JE04	Anticodon-binding protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.991
A0A136J1H2	A0A136JF60	Anticodon-binding protein.	WD40-repeat-containing domain protein.	0.996
A0A136J1H2	A0A136JH84	Anticodon-binding protein.	Dip2/Utp12 family-domain-containing protein.	0.996
A0A136J1H2	A0A136JI02	Anticodon-binding protein.	Utp14 protein-domain-containing protein.	0.992
A0A136J1H2	A0A136JIU5	Anticodon-binding protein.	WD40-repeat-containing domain protein.	0.992
A0A136J1H2	A0A136JKN9	Anticodon-binding protein.	Sas10 C-terminal domain-domain-containing protein.	0.993