A0A136JC34 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136JC34

Kinase-like domain-containing protein. (891 aa)

Predicted Functional Partners:

A0A136J226

0.990

A0A136JKI7

0.988

A0A136J9H7

0.955

A0A136J9J3

0.938

A0A136JHV0

0.931

A0A136JK54

0.930

A0A136J097

0.910

A0A136JC77

0.884

A0A136IMJ8

0.827

A0A136IRZ5

0.827

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136IMJ8	A0A136IRZ5	Ras small monomeric GTPase.	Ras family-domain-containing protein.	0.783
A0A136IMJ8	A0A136J097	Ras small monomeric GTPase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.636
A0A136IMJ8	A0A136J226	Ras small monomeric GTPase.	Kinase-like domain-containing protein.	0.807
A0A136IMJ8	A0A136J9H7	Ras small monomeric GTPase.	Kinase-like domain-containing protein.	0.776
A0A136IMJ8	A0A136JC34	Ras small monomeric GTPase.	Kinase-like domain-containing protein.	0.827
A0A136IMJ8	A0A136JC77	Ras small monomeric GTPase.	Kinase-like domain-containing protein.	0.776
A0A136IMJ8	A0A136JHV0	Ras small monomeric GTPase.	Non-specific serine/threonine protein kinase.	0.682
A0A136IMJ8	A0A136JK54	Ras small monomeric GTPase.	Non-specific serine/threonine protein kinase.	0.682
A0A136IRZ5	A0A136IMJ8	Ras family-domain-containing protein.	Ras small monomeric GTPase.	0.783
A0A136IRZ5	A0A136J097	Ras family-domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.636
A0A136IRZ5	A0A136J226	Ras family-domain-containing protein.	Kinase-like domain-containing protein.	0.807
A0A136IRZ5	A0A136J9H7	Ras family-domain-containing protein.	Kinase-like domain-containing protein.	0.776
A0A136IRZ5	A0A136JC34	Ras family-domain-containing protein.	Kinase-like domain-containing protein.	0.827
A0A136IRZ5	A0A136JC77	Ras family-domain-containing protein.	Kinase-like domain-containing protein.	0.776
A0A136IRZ5	A0A136JHV0	Ras family-domain-containing protein.	Non-specific serine/threonine protein kinase.	0.682
A0A136IRZ5	A0A136JK54	Ras family-domain-containing protein.	Non-specific serine/threonine protein kinase.	0.682
A0A136J097	A0A136IMJ8	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ras small monomeric GTPase.	0.636
A0A136J097	A0A136IRZ5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ras family-domain-containing protein.	0.636
A0A136J097	A0A136J226	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Kinase-like domain-containing protein.	0.991
A0A136J097	A0A136J9H7	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Kinase-like domain-containing protein.	0.949