A0A136JD86 protein (Microdochium bolleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A136JD86

Alpha/Beta hydrolase protein. (401 aa)

Predicted Functional Partners:

A0A136IQ22

0.814

A0A136J4T3

0.684

A0A136JAD6

0.684

A0A136JD97

0.684

A0A136JKI3

0.656

A0A136IN37

0.601

A0A136JB46

0.582

A0A136J6Q3

0.559

A0A136IX92

0.558

A0A136JFV4

0.499

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136IN37	A0A136IX92	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Allophanate hydrolase subunit 2-domain-containing protein.	0.804
A0A136IN37	A0A136J4T3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	HAD-superfamily subfamily IIA hydrolase.	0.529
A0A136IN37	A0A136JAD6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	HAD-like domain-containing protein.	0.529
A0A136IN37	A0A136JD86	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Alpha/Beta hydrolase protein.	0.601
A0A136IN37	A0A136JD97	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	HAD-like domain-containing protein.	0.529
A0A136IN37	A0A136JFV4	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Acyl-CoA dehydrogenase/oxidase.	0.582
A0A136IN37	A0A136JKI3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.611
A0A136IQ22	A0A136IX92	Tryptophan synthase.	Allophanate hydrolase subunit 2-domain-containing protein.	0.636
A0A136IQ22	A0A136J4T3	Tryptophan synthase.	HAD-superfamily subfamily IIA hydrolase.	0.824
A0A136IQ22	A0A136JAD6	Tryptophan synthase.	HAD-like domain-containing protein.	0.824
A0A136IQ22	A0A136JD86	Tryptophan synthase.	Alpha/Beta hydrolase protein.	0.814
A0A136IQ22	A0A136JD97	Tryptophan synthase.	HAD-like domain-containing protein.	0.824
A0A136IQ22	A0A136JKI3	Tryptophan synthase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.999
A0A136IX92	A0A136IN37	Allophanate hydrolase subunit 2-domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.804
A0A136IX92	A0A136IQ22	Allophanate hydrolase subunit 2-domain-containing protein.	Tryptophan synthase.	0.636
A0A136IX92	A0A136J4T3	Allophanate hydrolase subunit 2-domain-containing protein.	HAD-superfamily subfamily IIA hydrolase.	0.409
A0A136IX92	A0A136JAD6	Allophanate hydrolase subunit 2-domain-containing protein.	HAD-like domain-containing protein.	0.409
A0A136IX92	A0A136JD86	Allophanate hydrolase subunit 2-domain-containing protein.	Alpha/Beta hydrolase protein.	0.558
A0A136IX92	A0A136JD97	Allophanate hydrolase subunit 2-domain-containing protein.	HAD-like domain-containing protein.	0.409
A0A136IX92	A0A136JFV4	Allophanate hydrolase subunit 2-domain-containing protein.	Acyl-CoA dehydrogenase/oxidase.	0.467