STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JDA0E3 ubiquitin-protein ligase. (825 aa)    
Predicted Functional Partners:
A0A136IMX7
Polyubiquitin.
    
 0.975
A0A136J5T7
Uncharacterized protein.
    
 0.955
A0A136ITF6
VWFA domain-containing protein.
    
 0.941
A0A136IVP8
LDB19 domain-containing protein.
    
 
 0.919
A0A136IYS8
Ubiquitin-40S ribosomal protein S31 fusion protein.
    
 0.908
A0A136JHV8
CIA30 family protein-like protein.
    
 0.908
A0A136JHY3
BZIP domain-containing protein.
    
 0.908
A0A136JDR3
Ubiquitin-conjugating enzyme/RWD-like protein.
    
 0.880
A0A136J2U6
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.876
A0A136IZ31
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 
 0.865
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.