STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JDB6Transcription regulator HTH, apses-type DNA-binding domain-containing protein. (406 aa)    
Predicted Functional Partners:
A0A136ITB4
SUN domain-containing protein.
    
 
 0.888
A0A136JEF5
Man1-Src1p-C-terminal domain-domain-containing protein.
   
 
 0.888
A0A136IY03
Uncharacterized protein.
   
 
 0.813
A0A136IZS8
Uncharacterized protein.
   
 
 0.813
A0A136IU38
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
 0.696
A0A136IMX9
Uncharacterized protein.
     
 0.684
A0A136IPT5
Uncharacterized protein.
  
 
 0.660
A0A136IX26
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 
 0.643
A0A136IMD1
Diacylglycerol acyltransferase-domain-containing protein.
   
 
 0.639
A0A136JC64
Uncharacterized protein.
   
 
 0.569
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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