STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JDT0Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
A0A136JA65
Uncharacterized protein.
   
 0.797
A0A136JHH5
Lish protein.
   
 0.797
A0A136JEY2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.789
A0A136JGA9
Hist_deacetyl domain-containing protein.
    
 0.789
A0A136J6V7
WD40-repeat-containing domain protein.
   
 0.736
A0A136IZX3
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 0.730
A0A136JKP7
SCA7, zinc-binding domain-domain-containing protein.
    
 0.729
A0A136J3K8
Histone acetyltransferases subunit 3-domain-containing protein.
    
 0.722
A0A136IMR7
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
    
 0.718
A0A136JJS5
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.712
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
Server load: low (18%) [HD]