STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JEG5Oxoglutarate and iron-dependent oxygenase degradation C-term-domain-containing protein. (706 aa)    
Predicted Functional Partners:
A0A136JDG3
Armadillo-type protein.
  
 
 0.992
A0A136J9Z6
ABC transporter.
  
   0.926
A0A136J7D6
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.857
A0A136JH52
Coproporphyrinogen III oxidase.
   
  
 0.687
A0A136J5D9
N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.649
A0A136JI95
Bms1-type G domain-containing protein.
   
    0.636
A0A136J236
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.614
A0A136J5K5
Bms1-type G domain-containing protein.
   
    0.610
A0A136JIQ3
40S ribosomal protein S23-like protein; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.609
A0A136J692
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.596
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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