STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JFF8C2H2-type domain-containing protein. (886 aa)    
Predicted Functional Partners:
A0A136IP79
rRNA-processing arch domain-domain-containing protein.
   
 0.992
A0A136J743
MIF4G like-domain-containing protein.
   
 0.989
A0A136JA85
ATP-dependent RNA helicase SUB2.
 
 
 0.988
A0A136JK05
Nuclear cap-binding protein subunit 2.
    
 0.988
A0A136J428
Uncharacterized protein.
   
 
  0.979
A0A136J9T9
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.979
A0A136JB91
Peptidyl-prolyl cis-trans isomerase cyp8.
   
 
  0.979
A0A136JKC9
Armadillo-type protein.
   
 
  0.971
A0A136JE29
PWI domain-containing protein.
   
 
  0.965
A0A136ITV5
RRM domain-containing protein.
   
 0.871
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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