STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JFT1Pyridoxal phosphate-dependent transferase. (593 aa)    
Predicted Functional Partners:
A0A136IQ22
Tryptophan synthase.
  
 
 0.889
A0A136JBP4
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.878
A0A136JB96
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.866
A0A136IMW7
Cysteine synthase 2.
  
 0.851
A0A136J2P2
Homocysteine S-methyltransferase.
  
 
 0.833
A0A136JGX6
Cobalamin-independent methionine synthase.
  
 
 0.827
A0A136IN47
Homoserine dehydrogenase.
  
 
 0.810
A0A136ILY9
Uncharacterized protein.
  
 0.806
A0A136IP68
Methionine synthase.
  
 
 0.798
A0A136J535
Cys/Met metabolism PLP-dependent enzyme-domain-containing protein.
  
 
 0.786
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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