STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JFW2Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (331 aa)    
Predicted Functional Partners:
A0A136IQA5
Uncharacterized protein.
    
 0.982
A0A136JIA6
Ras family protein.
    
 0.868
A0A136JDX9
Snare Ykt6; Belongs to the synaptobrevin family.
    
 
 0.815
A0A136JDZ1
Ras family-domain-containing protein.
    
 0.814
A0A136JE20
ATP synthase regulation protein NCA2-domain-containing protein.
    
 0.814
A0A136J7F6
Small GTPase superfamily.
    
 0.813
A0A136IP16
Putative ras GTPase Rab11.
    
 0.807
A0A136JIJ3
GTP-binding protein YPTC4.
    
 0.779
A0A136JAL4
Uncharacterized protein.
   
 0.755
A0A136JG34
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.746
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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