STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JG08Proteasome component ECM29. (1823 aa)    
Predicted Functional Partners:
A0A136J3M4
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 
 0.944
A0A136J9I2
PCI domain-domain-containing protein.
   
 
 0.930
A0A136IX47
SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein.
    
 
 0.922
A0A136JI38
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
    
 
 0.922
A0A136ITF6
VWFA domain-containing protein.
   
 
 0.917
A0A136IQ73
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 
 0.915
A0A136JFP6
26S protease subunit rpt4; Belongs to the AAA ATPase family.
   
 
 0.912
A0A136JHI0
Putative 26s proteasome p44.5 protein.
    
 
 0.910
A0A136JF56
Proteasome complex subunit Rpn13 ubiquitin receptor-domain-containing protein.
    
 
 0.909
A0A136IZD6
Putative proteasome regulatory particle subunit.
   
 
 0.906
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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