Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| A0A136ILC7 | A0A136IPV9 | Cdc73 family RNA pol II accessory factor. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.976 |
| A0A136ILC7 | A0A136J163 | Cdc73 family RNA pol II accessory factor. | Plus3 domain-containing protein. | 0.996 |
| A0A136ILC7 | A0A136JBI6 | Cdc73 family RNA pol II accessory factor. | RNA polymerase II-associated. | 0.999 |
| A0A136ILC7 | A0A136JES3 | Cdc73 family RNA pol II accessory factor. | Mono-functional DNA-alkylating methyl methanesulfonate N-term-domain-containing protein. | 0.583 |
| A0A136ILC7 | A0A136JGZ6 | Cdc73 family RNA pol II accessory factor. | WD40-repeat-containing domain protein. | 0.999 |
| A0A136ILC7 | A0A136JK38 | Cdc73 family RNA pol II accessory factor. | Uncharacterized protein. | 0.977 |
| A0A136ILC7 | A0A136JK43 | Cdc73 family RNA pol II accessory factor. | Uncharacterized protein. | 0.977 |
| A0A136IPV9 | A0A136ILC7 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Cdc73 family RNA pol II accessory factor. | 0.976 |
| A0A136IPV9 | A0A136J163 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Plus3 domain-containing protein. | 0.976 |
| A0A136IPV9 | A0A136JBI6 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | RNA polymerase II-associated. | 0.969 |
| A0A136IPV9 | A0A136JES3 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Mono-functional DNA-alkylating methyl methanesulfonate N-term-domain-containing protein. | 0.459 |
| A0A136IPV9 | A0A136JGZ6 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | WD40-repeat-containing domain protein. | 0.904 |
| A0A136IPV9 | A0A136JK38 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Uncharacterized protein. | 0.936 |
| A0A136IPV9 | A0A136JK43 | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Uncharacterized protein. | 0.936 |
| A0A136IWU4 | A0A136IZA1 | NUC185 domain-domain-containing protein. | Tetratricopeptide. | 0.999 |
| A0A136IWU4 | A0A136JGZ6 | NUC185 domain-domain-containing protein. | WD40-repeat-containing domain protein. | 0.999 |
| A0A136IZA1 | A0A136IWU4 | Tetratricopeptide. | NUC185 domain-domain-containing protein. | 0.999 |
| A0A136IZA1 | A0A136JGZ6 | Tetratricopeptide. | WD40-repeat-containing domain protein. | 0.999 |
| A0A136J163 | A0A136ILC7 | Plus3 domain-containing protein. | Cdc73 family RNA pol II accessory factor. | 0.996 |
| A0A136J163 | A0A136IPV9 | Plus3 domain-containing protein. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.976 |
page 1 of 4