STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JHC3Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
A0A136JE05
Pre-mRNA splicing factor component-domain-containing protein.
    
   0.502
A0A136IR16
Uncharacterized protein.
    
 0.490
A0A136IWH2
RRM domain-containing protein.
    
 0.490
A0A136JFD0
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.444
A0A136JKI9
U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein.
    
 0.426
A0A136IM27
RRM domain-containing protein.
    
 0.410
A0A136J2I8
Uncharacterized protein.
    
 0.410
A0A136JGP8
Uncharacterized protein.
    
 0.410
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.