STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JHQ4GYF domain-containing protein. (444 aa)    
Predicted Functional Partners:
A0A136J4S6
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.950
A0A136JF61
Pre-mRNA-splicing ATP-dependent RNA helicase prp28; Belongs to the DEAD box helicase family.
   
 
 0.932
A0A136JBW8
Pre-mRNA processing splicing factor 8.
    
 
 0.931
A0A136J4I5
Putative pre-mRNA splicing factor prp1.
   
 
 0.929
A0A136J336
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.917
A0A136JIF2
SART-1 protein.
   
 
 0.900
A0A136JF29
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.891
A0A136JF75
Pre-mRNA-splicing helicase BRR2.
   
 
 0.891
A0A136J2X2
Sm domain-containing protein.
    
 
 0.864
A0A136J1W6
Sm domain-containing protein.
    
 
 0.863
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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