STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A136JJN5Restriction endonuclease type II-like protein. (216 aa)    
Predicted Functional Partners:
A0A136J9X4
DNA repair protein.
   
 0.999
A0A136JFB0
ERCC4 domain-containing protein.
   
 0.984
A0A136JGN7
XPA protein C-terminus-domain-containing protein.
    
 0.981
A0A136JF92
Nuclear protein localization protein 4.
    
 0.975
A0A136JAQ3
Asparaginyl-tRNA synthetase.
   
 0.971
A0A136JEE4
Uncharacterized protein.
    
 0.954
A0A136IXT4
NTF2 domain-containing protein.
   
 0.911
A0A136IXN6
Golgi apparatus membrane protein TVP18.
   
 0.904
A0A136J1Y7
Uncharacterized protein.
    
 0.889
SLX1
Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.
   
 0.880
Your Current Organism:
Microdochium bolleyi
NCBI taxonomy Id: 196109
Other names: M. bolleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.