STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY74389.1Rod shape-determining protein MreC. (277 aa)    
Predicted Functional Partners:
OQY74390.1
Rod shape-determining protein; Functions in MreBCD complex in some organisms.
 
 
 0.997
OQY74388.1
Rod shape-determining protein MreD.
  
 
 0.980
OQY74387.1
Penicillin-binding protein 2.
 
 
 0.961
OQY74386.1
Rod shape-determining protein RodA.
 
  
 0.867
OQY74261.1
Hypothetical protein.
  
  
 0.846
OQY74385.1
Orotidine-5'-phosphate decarboxylase.
       0.795
OQY74391.1
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
       0.795
OQY70896.1
Hypothetical protein.
 
 
 
 0.744
OQY70397.1
Hypothetical protein.
  
 
 0.709
OQY74392.1
Phosphoribosylglycinamide formyltransferase.
       0.706
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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