STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY74258.1Phosphate starvation-inducible protein PhoH. (318 aa)    
Predicted Functional Partners:
OQY71054.1
rRNA maturation RNase YbeY.
  
  
 0.897
OQY74699.1
DNA repair protein RecO.
  
    0.821
OQY74259.1
Peptidoglycan-binding protein LysM.
       0.614
OQY71976.1
GTPase Era.
 
  
 0.576
OQY74253.1
Ribosome silencing factor.
 
     0.556
OQY74329.1
Cytidine deaminase.
  
    0.485
OQY74260.1
Hypothetical protein.
       0.484
OQY70895.1
16S rRNA (cytosine(967)-C(5))-methyltransferase.
 
     0.476
OQY75976.1
Hypothetical protein.
 
   
 0.428
OQY73340.1
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis.
   
   0.401
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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