Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B6D44_01265 | OQY70757.1 | B6D44_01265 | B6D44_14985 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | Cytochrome b. | 0.517 |
B6D44_01265 | OQY72207.1 | B6D44_01265 | B6D44_10690 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase. | 0.986 |
B6D44_01265 | OQY72208.1 | B6D44_01265 | B6D44_10695 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | NAD(P)H-dependent oxidoreductase subunit E. | 0.990 |
B6D44_01265 | OQY73204.1 | B6D44_01265 | B6D44_08175 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | Molybdopterin oxidoreductase. | 0.989 |
B6D44_01265 | OQY74209.1 | B6D44_01265 | B6D44_05210 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | Hydrogenase. | 0.987 |
B6D44_01265 | OQY74769.1 | B6D44_01265 | B6D44_03495 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | Histidine kinase. | 0.977 |
B6D44_01265 | OQY74772.1 | B6D44_01265 | B6D44_03510 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | Ferredoxin. | 0.987 |
B6D44_01265 | OQY74773.1 | B6D44_01265 | B6D44_03515 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | NADH-quinone oxidoreductase subunit F. | 0.998 |
B6D44_01265 | OQY74774.1 | B6D44_01265 | B6D44_03520 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | NADH-quinone oxidoreductase subunit E. | 0.990 |
B6D44_01265 | OQY75637.1 | B6D44_01265 | B6D44_00940 | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | Ferredoxin. | 0.775 |
OQY70757.1 | B6D44_01265 | B6D44_14985 | B6D44_01265 | Cytochrome b. | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | 0.517 |
OQY70757.1 | OQY72207.1 | B6D44_14985 | B6D44_10690 | Cytochrome b. | Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase. | 0.536 |
OQY70757.1 | OQY73204.1 | B6D44_14985 | B6D44_08175 | Cytochrome b. | Molybdopterin oxidoreductase. | 0.999 |
OQY70757.1 | OQY74209.1 | B6D44_14985 | B6D44_05210 | Cytochrome b. | Hydrogenase. | 0.963 |
OQY70757.1 | OQY74769.1 | B6D44_14985 | B6D44_03495 | Cytochrome b. | Histidine kinase. | 0.491 |
OQY70757.1 | OQY74772.1 | B6D44_14985 | B6D44_03510 | Cytochrome b. | Ferredoxin. | 0.963 |
OQY70757.1 | OQY74773.1 | B6D44_14985 | B6D44_03515 | Cytochrome b. | NADH-quinone oxidoreductase subunit F. | 0.536 |
OQY72207.1 | B6D44_01265 | B6D44_10690 | B6D44_01265 | Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase. | Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop. | 0.986 |
OQY72207.1 | OQY70757.1 | B6D44_10690 | B6D44_14985 | Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase. | Cytochrome b. | 0.536 |
OQY72207.1 | OQY72208.1 | B6D44_10690 | B6D44_10695 | Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase. | NAD(P)H-dependent oxidoreductase subunit E. | 0.999 |
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