STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY72537.1tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA. (320 aa)    
Predicted Functional Partners:
OQY73885.1
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA.
  
  
 
0.865
OQY72538.1
protein-L-isoaspartate O-methyltransferase.
     
 0.818
OQY72535.1
Hypothetical protein.
       0.773
OQY72536.1
ATPase.
       0.773
OQY70938.1
DNA mismatch repair protein MutL.
  
 0.741
OQY72534.1
Peptide chain release factor 2.
     
 0.665
OQY75033.1
GTPase HflX.
  
  
 0.652
OQY75323.1
phenylalanine--tRNA ligase subunit beta.
 
  
 0.608
OQY72840.1
proline--tRNA ligase.
 
    0.585
OQY75009.1
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB.
 
  
 0.571
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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