STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY71918.1Carboxymuconolactone decarboxylase. (153 aa)    
Predicted Functional Partners:
OQY75653.1
Hypothetical protein.
 
  
 0.654
OQY71917.1
Flavodoxin reductase.
     
 0.647
OQY71911.1
Hypothetical protein.
    
 0.607
OQY71480.1
Carboxymuconolactone decarboxylase family protein.
    
 0.607
OQY71919.1
Hypothetical protein.
  
 
  0.603
OQY71916.1
Hypothetical protein.
       0.544
OQY73988.1
Alpha/beta hydrolase.
   
 
  0.491
OQY71530.1
Hypothetical protein.
   
 
  0.491
OQY71531.1
Hypothetical protein.
   
 
  0.491
OQY70746.1
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase.
   
 
  0.491
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.