STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY71950.1ClpV1 family T6SS ATPase. (872 aa)    
Predicted Functional Partners:
OQY72186.1
Molecular chaperone DnaK.
  
 
 0.993
OQY73189.1
ATP-dependent Clp protease proteolytic subunit.
  
 0.992
OQY71955.1
Hypothetical protein.
 0.976
OQY74380.1
Clp protease ClpS.
  
 
 0.938
OQY71951.1
Hypothetical protein.
 
 
 0.926
OQY71949.1
Hypothetical protein.
 
  
 0.917
OQY71956.1
Type VI secretion system-associated protein.
 
 
 0.899
OQY70515.1
Hypothetical protein.
 
 
 0.898
OQY73760.1
Nucleotide exchange factor GrpE.
  
 0.882
OQY73798.1
Hypothetical protein.
  
 0.874
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.