STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY71748.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
OQY71590.1
Biopolymer transporter Tol.
  
     0.563
OQY71749.1
Hypothetical protein.
       0.506
OQY75633.1
Hypothetical protein.
  
     0.496
OQY71779.1
Hypothetical protein.
  
     0.496
OQY73893.1
Hypothetical protein.
  
     0.480
OQY74374.1
Hypothetical protein.
  
     0.471
OQY75478.1
Hypothetical protein.
  
     0.461
OQY70946.1
Hypothetical protein.
  
     0.460
OQY76193.1
Hypothetical protein.
  
     0.457
OQY70650.1
DUF3308 domain-containing protein.
  
     0.447
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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