STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY71520.1methylmalonyl-CoA mutase. (723 aa)    
Predicted Functional Partners:
OQY71518.1
Hypothetical protein.
 
0.999
OQY73084.1
Methylmalonyl Co-A mutase-associated GTPase MeaB.
 
 0.998
OQY71521.1
Methylmalonyl Co-A mutase-associated GTPase MeaB.
 
 0.995
B6D44_01265
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop.
    
 0.967
OQY75329.1
methylmalonyl-CoA epimerase.
  
 0.964
OQY72527.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.936
OQY71387.1
4-hydroxybutyrate CoA-transferase.
  
 
 0.933
OQY75402.1
succinate--CoA ligase subunit alpha.
    
 0.928
OQY72215.1
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
    
 0.919
OQY70695.1
succinate--CoA ligase subunit beta.
  
 
 0.919
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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