STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY71370.11-deoxy-D-xylulose-5-phosphate synthase. (656 aa)    
Predicted Functional Partners:
OQY72302.1
Ribulose-phosphate 3-epimerase.
 0.983
OQY75967.1
Fructose-6-phosphate aldolase.
 
 0.972
B6D44_01265
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop.
  
 
 0.916
OQY71076.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
  
 
 0.882
OQY71242.1
Bifunctional phosphoglucose/phosphomannose isomerase.
 
 0.866
OQY74681.1
IMP dehydrogenase.
   
 
 0.864
OQY75023.1
Ribose 5-phosphate isomerase A.
 
 
 0.846
OQY75884.1
Phosphopyruvate hydratase.
   
 0.845
OQY71123.1
Tungsten formylmethanofuran dehydrogenase.
  
 
0.843
OQY71605.1
Pyruvate kinase.
  
 0.838
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.