STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY71044.1HNH endonuclease. (173 aa)    
Predicted Functional Partners:
OQY70253.1
Methionine synthase.
    
  0.672
OQY71047.1
SMC-Scp complex subunit ScpB.
  
    0.634
OQY71046.1
Segregation/condensation protein A.
       0.623
OQY71045.1
tryptophan--tRNA ligase.
       0.613
OQY71048.1
Pseudouridine synthase.
       0.605
OQY71049.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
       0.605
OQY71050.1
lysine--tRNA ligase.
       0.605
OQY70950.1
Peptidase.
  
     0.577
OQY71053.1
Gamma carbonic anhydrase family protein.
 
    0.534
OQY71051.1
Peptidase.
 
     0.520
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.