STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY70975.1Outer membrane protein assembly factor BamD. (252 aa)    
Predicted Functional Partners:
OQY73344.1
Outer membrane protein assembly factor BamA.
 
 0.966
OQY71590.1
Biopolymer transporter Tol.
 
 0.949
OQY74106.1
Hypothetical protein.
 
 0.946
OQY71243.1
Hypothetical protein.
 
 0.946
OQY75002.1
Hypothetical protein.
 
 0.915
OQY73732.1
Hypothetical protein.
  
 0.904
OQY73910.1
Hypothetical protein.
   
 0.903
OQY73927.1
Hypothetical protein.
   
 0.903
OQY72456.1
Hypothetical protein.
   
 0.903
OQY71244.1
Hypothetical protein.
   
 0.903
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.