STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY70853.1Cytidylate kinase. (225 aa)    
Predicted Functional Partners:
OQY75629.1
Ribosome biogenesis GTPase Der.
 
 0.985
OQY70852.1
30S ribosomal protein S1.
 
 
 0.975
OQY71048.1
Pseudouridine synthase.
 
  
 0.967
OQY72693.1
3-phosphoshikimate 1-carboxyvinyltransferase.
 
 
 0.941
OQY71076.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
  
 
 0.939
OQY75971.1
Riboflavin biosynthesis protein RibF.
 
  
 0.900
OQY75403.1
Nucleoside-diphosphate kinase.
  
 
 0.883
OQY74249.1
5'/3'-nucleotidase SurE.
    
 0.881
OQY73708.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent.
  
 
 0.879
OQY71047.1
SMC-Scp complex subunit ScpB.
 
  
 0.870
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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