STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY70759.1D-alanyl-D-alanine dipeptidase. (247 aa)    
Predicted Functional Partners:
OQY73485.1
Hypothetical protein.
     0.935
OQY70758.1
Hypothetical protein.
       0.723
OQY75912.1
D-alanine--D-alanine ligase.
    
 0.647
OQY74764.1
D-alanine--D-alanine ligase.
    
 0.647
OQY74765.1
D-alanine--D-alanine ligase.
    
 0.647
OQY73414.1
D-alanine--D-alanine ligase.
    
 0.647
OQY71684.1
D-alanine--D-alanine ligase.
    
 0.647
OQY75404.1
Hypothetical protein.
      0.632
OQY71714.1
Peptidase M19.
      0.542
OQY70757.1
Cytochrome b.
       0.524
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.