STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY69819.150S ribosomal protein L18. (121 aa)    
Predicted Functional Partners:
B6D44_03685
glutamine--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; frameshifted; internal stop.
   
 0.999
OQY74114.1
50S ribosomal protein L13.
  
 0.999
OQY69809.1
30S ribosomal protein S4.
 
 0.999
OQY69810.1
30S ribosomal protein S11.
 
 0.999
OQY69811.1
30S ribosomal protein S13.
 
 
 0.999
OQY69815.1
Preprotein translocase subunit SecY.
 
 
 0.999
OQY69816.1
50S ribosomal protein L15.
 
 0.999
OQY69817.1
50S ribosomal protein L30.
  
 0.999
OQY69818.1
30S ribosomal protein S5.
 
 0.999
OQY69820.1
50S ribosomal protein L6.
 0.999
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.