STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY69842.1DNA-directed RNA polymerase subunit beta. (1252 aa)    
Predicted Functional Partners:
OQY74103.1
DNA-directed RNA polymerase subunit omega.
  
 0.999
OQY69808.1
DNA-directed RNA polymerase subunit alpha.
 
 0.999
OQY69841.1
DNA-directed RNA polymerase subunit beta'.
 0.999
OQY69846.1
50S ribosomal protein L11.
 
 0.999
OQY75975.1
Transcription termination factor NusA.
  
 0.998
OQY69829.1
30S ribosomal protein S3.
 
 
 0.998
OQY69836.1
30S ribosomal protein S10.
  
 0.998
OQY69844.1
50S ribosomal protein L10.
 
 0.998
OQY69811.1
30S ribosomal protein S13.
 
 
 0.997
OQY69818.1
30S ribosomal protein S5.
 
 
 0.997
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.