STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY69843.150S ribosomal protein L7/L12. (126 aa)    
Predicted Functional Partners:
OQY69844.1
50S ribosomal protein L10.
 
 0.999
OQY69845.1
50S ribosomal protein L1.
 
 0.999
OQY69846.1
50S ribosomal protein L11.
 
 0.999
OQY71600.1
50S ribosomal protein L9.
  
 0.998
OQY69807.1
50S ribosomal protein L17.
 
 
 0.998
OQY69816.1
50S ribosomal protein L15.
  
 0.998
OQY69834.1
50S ribosomal protein L4.
  
 0.998
OQY69839.1
30S ribosomal protein S7.
 
 
 0.998
OQY69840.1
30S ribosomal protein S12.
 
 
 0.998
OQY69849.1
50S ribosomal protein L33.
  
 
 0.998
Your Current Organism:
Ignavibacteriales bacterium UTCHB2
NCBI taxonomy Id: 1961105
Other names: I. bacterium UTCHB2
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