STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY68884.1Hydrolase TatD. (282 aa)    
Predicted Functional Partners:
OQY68883.1
Hypothetical protein.
 
   
 0.956
OQY68885.1
Alkaline phosphatase family protein.
 
   
 0.943
OQY68888.1
Sugar phosphate isomerase.
 
  
 0.835
OQY68887.1
Hypothetical protein.
 
   
 0.816
OQY68882.1
Hypothetical protein.
       0.773
aroB
Catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis.
 
     0.770
OQY68881.1
Integration host factor subunit beta.
       0.689
OQY66000.1
Hypothetical protein.
 
     0.652
OQY64870.1
Hypothetical protein.
 
     0.652
OQY68880.1
Hypothetical protein.
       0.554
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.