STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY68341.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
OQY68340.1
Hypothetical protein.
       0.723
OQY68335.1
2-deoxy-D-gluconate 3-dehydrogenase.
  
  0.716
OQY65905.1
30S ribosomal protein S4.
   
 
  0.670
OQY65227.1
Phosphodiesterase.
 
     0.642
OQY69153.1
Hypothetical protein.
   
  0.639
OQY69168.1
Hypothetical protein.
   
  0.639
OQY68756.1
3-oxoacyl-[acyl-carrier-protein] reductase.
   
  0.639
OQY68647.1
Hypothetical protein.
   
  0.639
fabG
3-oxoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis.
   
  0.639
B6D46_04265
tRNA-Lys; Incomplete; partial in the middle of a contig; missing stop.
   
  0.639
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.