STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY67591.1DNA topoisomerase IV subunit B. (636 aa)    
Predicted Functional Partners:
OQY67592.1
DNA topoisomerase.
 0.999
OQY67651.1
DNA gyrase subunit A.
 0.999
OQY65569.1
DNA polymerase I.
  
 0.872
OQY64552.1
Hypothetical protein.
   
 
 0.834
OQY67293.1
acetate--CoA ligase.
   
 
 0.811
OQY66882.1
Hypothetical protein.
  
 
 0.778
OQY66380.1
ABC transporter.
  
 
 0.775
OQY69332.1
Amidinotransferase.
    
 0.768
OQY67653.1
DNA polymerase III subunit beta.
 
 
 0.752
OQY65632.1
Hypothetical protein.
   
 
 0.740
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.