STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY67747.1Type II 3-dehydroquinate dehydratase. (160 aa)    
Predicted Functional Partners:
OQY67741.1
Hypothetical protein.
  
 0.975
OQY67742.1
3-dehydroquinate synthase.
 
 0.950
OQY69207.1
Shikimate dehydrogenase.
 
 
 0.882
aroB
Catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis.
 
 0.825
OQY68874.1
Hypothetical protein.
    
 0.814
OQY68877.1
3-phosphoshikimate 1-carboxyvinyltransferase.
    
 0.808
OQY68141.1
Hypothetical protein.
     
 0.787
OQY67748.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein.
  
  
 0.745
OQY69121.1
methylmalonyl-CoA epimerase.
    
 0.743
OQY68888.1
Sugar phosphate isomerase.
  
 
 0.728
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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