STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY67189.150S ribosomal protein L27. (85 aa)    
Predicted Functional Partners:
OQY67190.1
50S ribosomal protein L21.
 
 0.999
OQY65878.1
50S ribosomal protein L3.
 
 
 0.997
OQY65897.1
50S ribosomal protein L15.
 
 
 0.997
OQY65905.1
30S ribosomal protein S4.
 
 
 0.997
OQY65907.1
50S ribosomal protein L17.
  
 
 0.997
OQY64845.1
50S ribosomal protein L19.
 
 
 0.997
OQY64850.1
30S ribosomal protein S16.
 
 
 0.997
OQY64661.1
30S ribosomal protein S15.
 
 
 0.997
OQY68697.1
30S ribosomal protein S2.
  
 
 0.996
OQY65877.1
30S ribosomal protein S10.
  
 
 0.996
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.