STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY67150.1Hypothetical protein. (281 aa)    
Predicted Functional Partners:
OQY67236.1
Fumarate hydratase; Catalyzes the formation of malate from fumerate.
  
 
 0.964
B6D46_07040
Aconitate hydratase; Catalyzes the conversion of citrate to isocitrate; incomplete; partial in the middle of a contig; missing stop.
  
 0.946
OQY66952.1
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 0.939
OQY66951.1
succinate--CoA ligase subunit beta.
  
 0.932
OQY64887.1
Hypothetical protein.
  
 0.932
OQY66646.1
Carbamoyl-phosphate synthase large subunit.
  
 0.928
OQY65285.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.924
OQY67293.1
acetate--CoA ligase.
  
 0.917
OQY67109.1
2-methylisocitrate lyase.
 
 0.916
OQY67604.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.906
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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