STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY67044.1Hypothetical protein. (419 aa)    
Predicted Functional Partners:
OQY67043.1
Hypothetical protein.
 
  
  0.877
OQY67055.1
Hypothetical protein.
  
     0.775
OQY67604.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.747
OQY67139.1
Hypothetical protein.
    
 0.707
OQY67042.1
Hypothetical protein.
  
  
  0.665
OQY67045.1
Hypothetical protein.
    
  0.557
OQY67041.1
AMP-dependent synthetase.
 
  
  0.541
OQY68087.1
Hypothetical protein.
  
     0.515
OQY67048.1
Carnitine dehydratase.
 
    
0.508
OQY67047.1
acyl-CoA dehydrogenase.
  
 
  0.476
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.