STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY66879.1Fis family transcriptional regulator. (457 aa)    
Predicted Functional Partners:
OQY66880.1
Hypothetical protein.
 
 0.934
OQY64893.1
Hypothetical protein.
  
 0.928
OQY66549.1
Hypothetical protein.
  
 0.878
OQY68820.1
Hypothetical protein.
  
 0.855
OQY68745.1
Hypothetical protein.
 
 0.844
OQY65696.1
Hypothetical protein.
  
 0.825
OQY66878.1
Hypothetical protein.
 
     0.807
OQY68589.1
RNA polymerase sigma-54 factor.
 
  
 0.789
OQY67576.1
Hypothetical protein.
  
 0.775
OQY69364.1
Hypothetical protein.
   
 0.751
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.