STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B6D46_09815Hypothetical protein; Internal stop. (507 aa)    
Predicted Functional Partners:
OQY67828.1
DNA processing protein DprA.
 
 0.862
OQY66469.1
DNA protecting protein DprA.
 
 0.828
OQY65009.1
YraN family protein.
 
  
 0.784
OQY64650.1
Hypothetical protein.
 
  
 0.762
OQY67728.1
Peptide deformylase.
      0.736
OQY64938.1
Protoporphyrinogen oxidase.
     
 0.665
OQY66325.1
Hypothetical protein.
   
   0.647
OQY67492.1
Hypothetical protein.
     
 0.613
OQY66972.1
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.613
OQY66406.1
Hypothetical protein.
  
 
  0.557
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.