STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY66390.1Ribonuclease HII. (226 aa)    
Predicted Functional Partners:
OQY68846.1
lipid-A-disaccharide synthase.
 
 
 0.980
OQY67653.1
DNA polymerase III subunit beta.
   
 
 0.963
OQY67119.1
Hypothetical protein.
  
 
 0.940
OQY65956.1
Hypothetical protein.
  
 
 0.931
OQY66898.1
Ribonuclease HI.
   
 
 0.909
OQY68822.1
Signal peptidase I.
 
  
 0.899
OQY67922.1
Thymidylate synthase.
  
 
 0.864
OQY65569.1
DNA polymerase I.
 
 
 0.743
OQY66152.1
Hypothetical protein.
   
   0.710
OQY67434.1
dephospho-CoA kinase.
  
    0.642
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.