STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY65296.1Hypothetical protein. (491 aa)    
Predicted Functional Partners:
OQY68693.1
Isoprenyl transferase.
 
 
 0.941
OQY66818.1
Squalene synthase HpnD.
  
 0.905
OQY65981.1
Hypothetical protein.
 
  
0.841
OQY68137.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
    
 0.837
OQY66819.1
Squalene synthase HpnC.
  
 0.780
OQY67916.1
Ribonuclease J.
  
    0.779
OQY65295.1
Hypothetical protein.
       0.773
OQY65297.1
Hypothetical protein.
       0.773
OQY65298.1
Hypothetical protein.
 
     0.764
OQY66821.1
Squalene--hopene cyclase.
  
 
 0.714
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.