STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY65142.1Ferrous iron transport protein B. (724 aa)    
Predicted Functional Partners:
OQY65143.1
Hypothetical protein.
 
  
 0.997
OQY65144.1
DNA ligase (NAD(+)) LigA.
     
 0.648
OQY65141.1
Hypothetical protein.
       0.551
OQY69017.1
Hypothetical protein.
     
 0.482
OQY64805.1
Glutamate synthase.
     
 0.421
OQY65972.1
Hypothetical protein.
  
    0.409
OQY65279.1
Glutamate synthase large subunit.
      
 0.402
OQY66470.1
DNA topoisomerase I.
      
 0.400
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.