STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY64825.1Hypothetical protein. (387 aa)    
Predicted Functional Partners:
OQY69252.1
Hypothetical protein.
   
    0.774
OQY64961.1
Hypothetical protein.
    
 0.712
OQY69140.1
Aspartate aminotransferase family protein.
  
 0.709
OQY67136.1
Hypothetical protein.
     
 0.696
OQY65653.1
Hypothetical protein.
    
 0.683
OQY67772.1
Aspartate aminotransferase family protein.
   
 0.669
OQY65613.1
Hypothetical protein.
   
 0.669
B6D46_13800
Peptide chain release factor 2; Frameshifted.
   
 0.669
OQY69139.1
Ornithine carbamoyltransferase.
    
 0.664
OQY66402.1
Hypothetical protein.
   
   0.657
Your Current Organism:
Polyangiaceae bacterium UTPRO1
NCBI taxonomy Id: 1961108
Other names: P. bacterium UTPRO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.