STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQZ03544.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
OQZ03611.1
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA.
 
  
  0.669
OQZ03545.1
Hypothetical protein.
       0.604
OQZ04447.1
Hypothetical protein.
  
 
 0.591
OQZ05075.1
DNA polymerase I.
   
 
 0.551
OQZ01426.1
Hypothetical protein.
     
 0.510
OQZ02098.1
ATP-binding protein.
     
 0.453
OQZ04382.1
Hypothetical protein.
  
    0.446
OQZ04345.1
Hypothetical protein.
 
   
 0.416
OQZ03687.1
DNA polymerase IV.
 
   
 0.402
OQZ04787.1
Hypothetical protein.
   
    0.400
Your Current Organism:
Brocadia sp. UTAMX1
NCBI taxonomy Id: 1961113
Other names: C. Brocadia sp. UTAMX1, Candidatus Brocadia sp. UTAMX1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.