Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0037PFAM: aldehyde dehydrogenase; KEGG: nfa:nfa35030 putative aldehyde dehydrogenase. (537 aa)    
Predicted Functional Partners:
Noca_0085
PFAM: dihydrodipicolinate synthetase; KEGG: sma:SAV1731 putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
 
 0.942
Noca_0690
Dihydrodipicolinate synthase/N-acetylneuraminate lyase-like protein; KEGG: jan:Jann_1453 dihydrodipicolinate synthetase.
  
 
 0.907
Noca_4199
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro03790 aldehyde dehydrogenase (NAD+).
  
  
 
0.907
Noca_4281
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro04375 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
  
 
0.906
Noca_1737
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase, central region; KEGG: sco:SCO5281 putative 2-oxoglutarate dehydrogenase.
  
 0.895
Noca_0537
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tfu:Tfu_2674 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
   
 0.831
Noca_0038
PFAM: Dimethylmenaquinone methyltransferase; KEGG: pol:Bpro_2296 dimethylmenaquinone methyltransferase.
 
   
 0.830
Noca_0536
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: sma:SAV4876 2-oxoglutarate ferredoxin oxidoreductase, beta subunit.
    
 0.806
Noca_3575
Isocitrate dehydrogenase, NADP-dependent; KEGG: sma:SAV7214 putative isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; Belongs to the monomeric-type IDH family.
     
 0.801
Noca_4189
KEGG: rha:RHA1_ro02904 possible fumarylacetoacetate hydrolase.
 
   
 0.724
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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