STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0045PFAM: MaoC domain protein dehydratase. (306 aa)    
Predicted Functional Partners:
Noca_0044
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ape:APE1484 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.853
Noca_0043
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE1936 sugar permeases; TC 3.A.1.1.-.
  
    0.685
Noca_0042
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins; TC 3.A.1.1.-.
       0.660
Noca_4343
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.610
Noca_0041
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: mes:Meso_4520 extracellular solute-binding protein, family 1; TC 3.A.1.1.-.
       0.589
Noca_2854
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1904 fatty acid oxidation complex alpha-subunit.
  
 0.477
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 0.477
Noca_0039
Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mes:Meso_2971 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
 
 0.472
Noca_0036
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rxy:Rxyl_2477 thiamine pyrophosphate enzyme-like TPP binding region; Belongs to the TPP enzyme family.
   
 0.463
Noca_0040
PFAM: MmgE/PrpD family protein; KEGG: bur:Bcep18194_B1168 MmgE/PrpD family protein.
       0.453
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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