STRINGSTRING
Noca_0058 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0058" - LacI family transcriptional regulator in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0058LacI family transcriptional regulator (338 aa)    
Predicted Functional Partners:
Noca_0056
Glycosyl hydrolase family 32 protein (415 aa)
         
  0.782
Noca_3184
PTS system fructose subfamily transporter subunit IIC (682 aa)
         
  0.771
Noca_0545
Ribokinase-like domain-containing protein (304 aa)
   
  0.737
Noca_0057
Hypothetical protein (482 aa)
 
          0.701
Noca_0062
Ribokinase-like domain-containing protein (306 aa)
 
   
  0.668
Noca_0060
Binding-protein-dependent transport systems inner membrane component (289 aa)
         
  0.654
Noca_0059
Extracellular solute-binding protein (439 aa)
 
          0.632
Noca_3181
Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (580 aa)
     
 
  0.609
Noca_0077
Inner-membrane translocator (331 aa)
   
   
  0.586
Noca_2607
Galactokinase (399 aa)
 
     
  0.586
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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