Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0084FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sco:SCO6291 secreted oxidase. (488 aa)    
Predicted Functional Partners:
Noca_3022
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sco:SCO2026 putative glutamate synthase large subunit.
  
 
 0.999
Noca_0082
PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV1734 oxidoreductase.
  
 0.995
Noca_0085
PFAM: dihydrodipicolinate synthetase; KEGG: sma:SAV1731 putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
 
 0.994
Noca_0083
KEGG: sma:SAV1733 hypothetical protein.
   
 0.974
Noca_0690
Dihydrodipicolinate synthase/N-acetylneuraminate lyase-like protein; KEGG: jan:Jann_1453 dihydrodipicolinate synthetase.
   
 
 0.905
Noca_0086
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro02898 aldehyde dehydrogenase (NADP+).
 
 
 
 0.904
Noca_1780
D-amino-acid:oxygen oxidoreductase (deaminating); PFAM: FAD dependent oxidoreductase; KEGG: rxy:Rxyl_0526 D-amino acid oxidase.
     
 0.900
Noca_0081
PFAM: peptidase M19, renal dipeptidase; KEGG: mlo:mlr6286 similar to dipeptidase.
 
     0.807
Noca_0080
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: gka:GK2893 N-methylhydantoinase B (ATP-hydrolyzing).
 
     0.806
Noca_0079
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mta:Moth_1967 5-oxoprolinase (ATP-hydrolyzing).
 
     0.800
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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