Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Noca_0095PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mlo:mll9131 hydantoinase. (517 aa)    
Predicted Functional Partners:
Noca_0096
PFAM: protein of unknown function DUF917; KEGG: mlo:mll9130 hypothetical protein.
     0.994
Noca_0098
PFAM: protein of unknown function DUF917; KEGG: mes:Meso_1849 protein of unknown function DUF917.
     0.975
Noca_0080
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: gka:GK2893 N-methylhydantoinase B (ATP-hydrolyzing).
 
 
 0.851
Noca_1497
PFAM: Hydantoinase B/oxoprolinase; KEGG: rha:RHA1_ro03486 probable hydantoin utilization protein B.
 
 
 0.778
Noca_0097
Regulator of polyketide synthase expression-like protein; KEGG: sco:SCO1052 regulatory protein.
 
     0.746
Noca_0094
PFAM: Asp/Glu racemase; KEGG: chy:CHY_1338 hydantoin racemase.
 
   
 0.737
Noca_0093
PFAM: protein of unknown function DUF1445; KEGG: pst:PSPTO_5379 hypothetical protein; Belongs to the D-glutamate cyclase family.
       0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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